PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009774843.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 374aa    MW: 42081.9 Da    PI: 5.0456
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009774843.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.81.1e-1783131355
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     + GVr+++ +gr++AeIrdp++   + r++lg+f+ta+eAa a+++a+++++g
  XP_009774843.1  83 FLGVRRRP-WGRYAAEIRDPTT---KERHWLGTFDTAQEAALAYDRAALSMKG 131
                     56******.**********965...5************************987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003809.1E-3282145IPR001471AP2/ERF domain
PROSITE profilePS5103220.61382139IPR001471AP2/ERF domain
CDDcd000184.01E-2882138No hitNo description
SuperFamilySSF541715.69E-2083139IPR016177DNA-binding domain
PRINTSPR003671.5E-78394IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.109.4E-2883138IPR001471AP2/ERF domain
PfamPF008474.2E-1185131IPR001471AP2/ERF domain
PRINTSPR003671.5E-7105121IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010102Biological Processlateral root morphogenesis
GO:0010432Biological Processbract development
GO:0010451Biological Processfloral meristem growth
GO:0010582Biological Processfloral meristem determinacy
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 374 aa     Download sequence    Send to blast
MATTLSIQTS LLSSISQNKN KNPQYQKMSS SSTPSSENIN QLPFGMFEPI RTPTGYSWLQ  60
RNTAICQPSE KRGRRKQAEP GRFLGVRRRP WGRYAAEIRD PTTKERHWLG TFDTAQEAAL  120
AYDRAALSMK GTQARTNFIY TCDNNNNSFP SLISPFDNGQ NFLQPNSHFN FKNATTQNNN  180
KNVITTTTSD NETSNNSHES YSSYGSSPNE NNSFFLSPSH ENSGYLDCIV PDSCLKPPPS  240
STPQSKMITK NSQENSNIDH HQNYMTTFSE NPSNFSFNSG FWDGDDQEKY TSSWENSCEL  300
SAMMMNNNIM SSSSEINGNN INEMVDVGNC YYPSMEIDHD NMMVQPSEIT TNTTTTTSSV  360
FQPFGDVEFG YSLF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A2e-1978138162ATERF1
3gcc_A2e-1978138162ATERF1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00520DAPTransfer from AT5G18560Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009774843.10.0PREDICTED: ethylene-responsive transcription factor ERF086
TrEMBLM1C2J31e-126M1C2J3_SOLTU; Uncharacterized protein
STRINGPGSC0003DMT4000583561e-126(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA93072125
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18560.11e-48ERF family protein